Setting up a GROMACS MD run starting from a premade binary run input file
Welcome to the GROMACS web server your entry point for molecular dynamics on the GRID. New molecular dynamics simulations are started by filling out the form below. Once submitted you will be redirected to the results page for your run where you will be informed on its progress and will be able to retrieve the results when the job is finished.
GROMACS file upload form
Gromacs portable binary run input file
File name (.tpr)
Gromacs checkpoint file
File name (.cpt)
Simulation time
Please specify the simulation time in ns
Perform basic set of analysis on the MD results
Username and password
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